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Deficiency/Duplication mapping data submission Form

Not all of the boxes have to be filled to submit your data, except the required ones.

Each cross requires a separate form.
Also each locus, about which deletion or duplicaton conclusions can be drawn, requires a separate form.

One mapping experiment therefore links together one rearrangement with only one locus.

If you would like more guidance and further examples click here for more information.

The possible permutations for the Results line are:

Deficiency Duplication
  • xDfA deletes geneB
  • xDfA does not delete geneB

  • xDfA includes xDfB
  • xDfA does not include xDfB

  • xDfA overlaps xDfB
  • xDfA does not overlap xDfB

  • xDfA complements geneB
  • xDfA does not complement geneB
  • xDpA includes geneB
  • xDpA does not include geneB

  • xDpA includes xDfB
  • xDpA does not include xDfB

    •

    REQUIRED
    Submitter's Email: 
    (please enter for contact purpose)
    If you don't get a verification email,
    email us at webmaster@wormbase.org
    Data provider:  (eg. Hodgkin JA)
    Rearrangement:  (eg. mcDf1, qDp2)
    Deletion or duplication ( fill in only one of the three for each experiment )
        Locus : (if concerns a locus, eg. unc-119)
        Rearrangement : (if concerns a 2nd rearrangement)
        Clone : (if concerns a clone, eg. B0334)
    Results:  (eg. sDf3 deletes unc-303
    or see the permutations on top)
    GENETIC

    Genotype : (if available)
    (eg, unc-42(e270)
    her-1(e224)/dpy-11(e1518))
    Date : (format yyyy-mm)  (if available, e.g. 2004-01)
    PERSONAL

    Comment : (if available)

    Deficiency/Duplication Examples:

    Example 1:

    Mapper: Hodgkin JA
    Date: 1978-09
    Genotype: eDf1(e1405)/her-1(e1518) unc-42(e270) sma-1(e30) XO
    Locus: her-1
    Results: eDf1 does not delete her-1 ! see above for allowed list

    Example 2:

    Mapper: Hodgkin JA
    Date: 1994-01
    Rearrangement: eDf100
    Locus: cm12c12
    Results: eDf100 deletes cm04g11
    Comment: cm04g11 is a cDNA hybridising to Y38B9 and Y4C6 on the polytene grid, assayed by PCR.

    Top

    If you have any problems, questions, or comments, please contact gnw@wormbase.org